Basic Information
Locus ID:
Dusal.0259s00005.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Transient receptor potential cation channel, subfamily A, member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold259 | 156773 | 159916 | + | Dusal.0259s00005.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 56,851.89 Da | 54.35 | 94.45 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13637 | Ankyrin repeats (many copies) | 336 | 377 | 1.8E-10 | - |
| Pfam | PF00023 | Ankyrin repeat | 414 | 437 | 4.0E-4 | IPR002110 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 175 | 439 | 4.68E-28 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 327 | 484 | 1.3E-22 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 121 | 326 | 1.7E-7 | IPR036770 |
| SMART | SM00248 | ANK_2a | 334 | 363 | 1.1E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 171 | 200 | 1600.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 367 | 403 | 170.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 413 | 443 | 0.018 | IPR002110 |
| SMART | SM00248 | ANK_2a | 259 | 291 | 15.0 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 334 | 366 | 15.22687 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 334 | 366 | 13.840654 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 413 | 439 | 9.72461 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 413 | 439 | 9.701759 | - |
| PRINTS | PR01415 | Ankyrin repeat signature | 350 | 364 | 7.6E-6 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 260 | 275 | 7.6E-6 | IPR002110 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044392431.1 | E3 ubiquitin-protein ligase KEG-like [Triticum aestivum] | 0 |
| Q96KQ7 | Histone-lysine N-methyltransferase EHMT2 OS=Homo sapiens OX=9606 GN=EHMT2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A7S3VSW8 | ANK_REP_REGION domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS19421 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 14 | Dusal.0002s00084.v1.0, Dusal.0047s00008.v1.0 ... |