Basic Information
Locus ID:
Dusal.0232s00004.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
RNA polymerase II C-terminal domain phosphatase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold232 | 96382 | 118056 | + | Dusal.0232s00004.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 143,283.19 Da | 72.39 | 49.33 | -0.97 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03031 | NLI interacting factor-like phosphatase | 69 | 214 | 1.4E-6 | IPR004274 |
| SUPERFAMILY | SSF56784 | HAD-like | 67 | 224 | 1.73E-7 | IPR036412 |
| Gene3D | G3DSA:3.40.50.1000 | - | 41 | 250 | 1.7E-15 | IPR023214 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1063 | 1080 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 830 | 845 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 777 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 1385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1251 | 1283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 676 | 694 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1200 | 1226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1335 | 1356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 937 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 661 | 675 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1168 | 1182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 555 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21670.1 | C-terminal domain phosphatase-like 1. encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. | 0 |
| RefSeq | XP_002958592.1 | hypothetical protein VOLCADRAFT_99895 [Volvox carteri f. nagariensis] | 0 |
| Q5YDB6 | RNA polymerase II C-terminal domain phosphatase-like 1 OS=Arabidopsis thaliana OX=3702 GN=CPL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3QXX6 | protein-serine/threonine phosphatase OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS11681 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology