Basic Information
Locus ID:
Dusal.0210s00012.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold210 | 367450 | 415618 | - | Dusal.0210s00012.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 51,120.55 Da | 28.82 | 88.91 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13676 | TIR domain | 339 | 430 | 3.9E-11 | IPR000157 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 221 | 289 | 8.7E-11 | IPR020683 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 88 | 165 | 2.8E-12 | IPR020683 |
| Pfam | PF00023 | Ankyrin repeat | 169 | 197 | 0.0036 | IPR002110 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 334 | 420 | 4.97E-9 | IPR035897 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 90 | 290 | 9.02E-60 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 187 | 295 | 3.5E-33 | IPR036770 |
| Gene3D | G3DSA:3.40.50.10140 | - | 304 | 442 | 3.9E-14 | IPR035897 |
| Gene3D | G3DSA:1.25.40.20 | - | 76 | 186 | 4.8E-30 | IPR036770 |
| SMART | SM00248 | ANK_2a | 103 | 132 | 1.2E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 169 | 198 | 0.011 | IPR002110 |
| SMART | SM00248 | ANK_2a | 136 | 165 | 3.8E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 235 | 264 | 2.5E-6 | IPR002110 |
| SMART | SM00248 | ANK_2a | 202 | 231 | 0.24 | IPR002110 |
| SMART | SM00248 | ANK_2a | 268 | 297 | 160.0 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 202 | 234 | 10.4992 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 202 | 230 | 9.54257 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 103 | 135 | 12.822969 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 235 | 267 | 13.624269 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 103 | 135 | 11.452829 | - |
| ProSiteProfiles | PS50104 | TIR domain profile. | 335 | 471 | 10.250113 | IPR000157 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 235 | 267 | 12.248772 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 136 | 168 | 11.479361 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 136 | 168 | 12.84968 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 169 | 197 | 11.107922 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 169 | 201 | 11.86141 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 251 | 265 | 1.5E-5 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 137 | 152 | 1.5E-5 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 327 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7R9VEH2 | TIR domain-containing protein OS=Chlamydomonas euryale OX=1486919 GN=CEUR00632_LOCUS11023 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |