Basic Information
Locus ID:
Dusal.0210s00006.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
RING-variant domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold210 | 114374 | 119801 | + | Dusal.0210s00006.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 41,143.63 Da | 76.04 | 62.84 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12906 | RING-variant domain | 13 | 61 | 9.4E-8 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 9 | 64 | 6.53E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 66 | 1.6E-9 | IPR013083 |
| SMART | SM00744 | ringv_2 | 12 | 62 | 1.2E-4 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 5 | 68 | 14.831552 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 268 | - | - |
| Coils | Coil | Coil | 162 | 196 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042925489.1 | uncharacterized protein CHLRE_03g143987v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A8J4D9B6 | RING-CH-type domain-containing protein OS=Volvox reticuliferus OX=1737510 GN=Vretifemale_6600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0210s00006.v1.0, Dusal.0593s00009.v1.0 |