Basic Information
Locus ID:
Dusal.0209s00011.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Belongs to the helicase family. RecQ subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold209 | 162187 | 187704 | + | Dusal.0209s00011.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 104,146.45 Da | 45.69 | 68.05 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18794 | SF2_C_RecQ | 491 | 594 | 2.36703E-56 | - |
| CDD | cd17920 | DEXHc_RecQ | 207 | 402 | 4.94929E-87 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 219 | 392 | 6.7E-18 | IPR011545 |
| Pfam | PF16124 | RecQ zinc-binding | 598 | 698 | 4.1E-11 | IPR032284 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 493 | 584 | 7.1E-16 | IPR001650 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 257 | 604 | 1.98E-48 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 184 | 413 | 6.1E-79 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 414 | 705 | 6.1E-54 | IPR027417 |
| SMART | SM00490 | helicmild6 | 503 | 585 | 1.5E-24 | IPR001650 |
| SMART | SM00487 | ultradead3 | 213 | 423 | 4.0E-25 | IPR014001 |
| TIGRFAM | TIGR00614 | recQ_fam: ATP-dependent DNA helicase, RecQ family | 210 | 653 | 1.8E-129 | IPR004589 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 225 | 406 | 18.286596 | IPR014001 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 483 | 628 | 18.530743 | IPR001650 |
| ProSitePatterns | PS00690 | DEAH-box subfamily ATP-dependent helicases signature. | 344 | 353 | - | IPR002464 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 651 | 678 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 929 | 981 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 801 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 834 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 818 | 834 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 651 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 90 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05740.2 | - | 0 |
| RefSeq | XP_005645319.1 | ATP-dependent DNA helicase [Coccomyxa subellipsoidea C-169] | 0 |
| Q9FT74 | ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana OX=3702 GN=RECQL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A250WYA2 | ATP-dependent DNA helicase OS=Chlamydomonas eustigma OX=1157962 GN=CEUSTIGMA_g3026.t1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology