Basic Information
Locus ID:
Dusal.0204s00004.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold204 | 76119 | 107913 | - | Dusal.0204s00004.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.97 | 101,529.09 Da | 54.05 | 72.32 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 116 | 168 | 1.7E-5 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 702 | 887 | 3.34E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 102 | 177 | 1.0E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 775 | 906 | 3.3E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 694 | 774 | 1.9E-5 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 145 | 170 | 0.0066 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 701 | 726 | 94.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 844 | 869 | 13.0 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 569 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 609 | 676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 609 | 629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 569 | - | - |
| Coils | Coil | Coil | 447 | 467 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042927358.1 | uncharacterized protein CHLRE_02g101250v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7S3VSB3 | VHS domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS19593 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 25 | Dusal.0002s00013.v1.0, Dusal.0075s00019.v1.0 ... |