Basic Information
Locus ID:
Dusal.0180s00023.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Tetratricopeptide repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold180 | 431262 | 457107 | + | Dusal.0180s00023.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 76,673.89 Da | 36.20 | 102.30 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13374 | Tetratricopeptide repeat | 275 | 304 | 0.011 | - |
| Pfam | PF13424 | Tetratricopeptide repeat | 483 | 552 | 4.0E-14 | - |
| Pfam | PF13424 | Tetratricopeptide repeat | 567 | 636 | 1.7E-16 | - |
| Pfam | PF13424 | Tetratricopeptide repeat | 399 | 468 | 6.6E-15 | - |
| Pfam | PF13374 | Tetratricopeptide repeat | 352 | 393 | 1.5E-8 | - |
| Pfam | PF13374 | Tetratricopeptide repeat | 648 | 687 | 4.0E-10 | - |
| SUPERFAMILY | SSF48452 | TPR-like | 307 | 674 | 3.87E-24 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 348 | 536 | 2.9E-71 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 537 | 706 | 7.1E-56 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 231 | 325 | 4.9E-5 | IPR011990 |
| SMART | SM00028 | tpr_5 | 563 | 596 | 71.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 437 | 470 | 15.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 521 | 554 | 8.4 | IPR019734 |
| SMART | SM00028 | tpr_5 | 479 | 512 | 100.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 647 | 680 | 13.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 395 | 428 | 11.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 353 | 386 | 34.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 605 | 638 | 15.0 | IPR019734 |
| PRINTS | PR00381 | Kinesin light chain signature | 514 | 533 | 1.4E-9 | IPR002151 |
| PRINTS | PR00381 | Kinesin light chain signature | 645 | 665 | 1.4E-9 | IPR002151 |
| PRINTS | PR00381 | Kinesin light chain signature | 601 | 618 | 1.4E-9 | IPR002151 |
| PRINTS | PR00381 | Kinesin light chain signature | 680 | 701 | 1.4E-9 | IPR002151 |
Gene Ontology
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 25 | Dusal.0002s00013.v1.0, Dusal.0075s00019.v1.0 ... |