Basic Information
Locus ID:
Dusal.0177s00015.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Lipoxygenase homology 2 (beta barrel) domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold177 | 294107 | 311394 | - | Dusal.0177s00015.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.67 | 40,788.02 Da | 47.10 | 68.83 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03451 | HELP motif | 279 | 345 | 1.4E-18 | IPR005108 |
| SUPERFAMILY | SSF47473 | EF-hand | 194 | 246 | 1.38E-6 | IPR011992 |
| Gene3D | G3DSA:2.130.10.10 | - | 303 | 314 | 2.1E-17 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 315 | 359 | 2.1E-17 | IPR015943 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 75 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002946691.1 | hypothetical protein VOLCADRAFT_86901 [Volvox carteri f. nagariensis] | 0 |
| TrEMBL | A0A8J4G1P6 | HELP domain-containing protein (Fragment) OS=Volvox reticuliferus OX=1737510 GN=Vretimale_4736 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0035s00014.v1.0, Dusal.0041s00007.v1.0 ... |