HalophFGD

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Basic Information
Locus ID: Dusal.0177s00014.v1.0
Species & Taxonomic ID: Dunaliella salina & 3046
Genome Assembly: v1.0
Description: HELP motif
Maps and Mapping Data
Chromosome Start End Strand ID
scaffold177 204502 291562 - Dusal.0177s00014.v1.0
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.41 316,511.63 Da 26.31 71.04 -0.51
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd01756 PLAT_repeat 1126 1240 8.13853E-41 -
CDD cd01756 PLAT_repeat 998 1117 1.14077E-37 -
CDD cd01756 PLAT_repeat 613 731 6.15487E-39 -
CDD cd01756 PLAT_repeat 740 855 1.85302E-42 -
CDD cd01756 PLAT_repeat 865 984 5.21875E-46 -
CDD cd01756 PLAT_repeat 2198 2300 1.16311E-37 -
CDD cd01756 PLAT_repeat 1685 1799 2.29745E-40 -
CDD cd01756 PLAT_repeat 2069 2177 2.00574E-40 -
Pfam PF01477 PLAT/LH2 domain 1625 1666 8.2E-5 IPR001024
Pfam PF01477 PLAT/LH2 domain 1946 2049 1.1E-18 IPR001024
Pfam PF01477 PLAT/LH2 domain 2198 2300 9.2E-17 IPR001024
Pfam PF01477 PLAT/LH2 domain 2503 2606 1.1E-8 IPR001024
Pfam PF01477 PLAT/LH2 domain 1379 1485 8.2E-19 IPR001024
Pfam PF01477 PLAT/LH2 domain 998 1110 4.2E-16 IPR001024
Pfam PF01477 PLAT/LH2 domain 2322 2426 3.2E-16 IPR001024
Pfam PF01477 PLAT/LH2 domain 2071 2173 6.8E-21 IPR001024
Pfam PF01477 PLAT/LH2 domain 1687 1791 4.3E-17 IPR001024
Pfam PF01477 PLAT/LH2 domain 742 850 1.8E-17 IPR001024
Pfam PF00400 WD domain, G-beta repeat 371 406 0.032 IPR001680
Pfam PF00400 WD domain, G-beta repeat 123 155 0.084 IPR001680
Pfam PF01477 PLAT/LH2 domain 868 977 1.3E-19 IPR001024
Pfam PF01477 PLAT/LH2 domain 1817 1920 1.3E-15 IPR001024
Pfam PF01477 PLAT/LH2 domain 1127 1229 7.1E-19 IPR001024
Pfam PF01477 PLAT/LH2 domain 1249 1365 2.4E-16 IPR001024
Pfam PF01477 PLAT/LH2 domain 614 720 6.8E-13 IPR001024
Pfam PF01477 PLAT/LH2 domain 488 592 6.3E-14 IPR001024
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 1505 1666 6.98E-15 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 1944 2050 1.19E-30 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 2316 2426 8.64E-24 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 995 1109 4.52E-27 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 1248 1363 5.22E-21 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 1375 1484 8.1E-30 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 1812 1920 3.6E-27 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 611 723 3.08E-27 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 2068 2177 4.14E-31 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 1121 1231 1.03E-32 IPR036392
SUPERFAMILY SSF50978 WD40 repeat-like 36 407 1.42E-44 IPR036322
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 484 597 4.68E-28 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 1685 1792 1.22E-28 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 2193 2302 8.02E-29 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 2502 2609 8.84E-17 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 736 850 9.05E-32 IPR036392
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain) 862 979 2.52E-30 IPR036392
Gene3D G3DSA:2.40.180.10 Catalase core domain 849 976 9.7E-37 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 1925 2051 8.3E-35 -
Gene3D G3DSA:2.130.10.10 - 116 409 8.7E-75 IPR015943
Gene3D G3DSA:2.40.180.10 Catalase core domain 1110 1235 8.7E-40 -
Gene3D G3DSA:2.130.10.10 - 23 115 1.5E-6 IPR015943
Gene3D G3DSA:2.60.60.20 PLAT/LH2 domain 2490 2613 3.6E-18 -
Gene3D G3DSA:2.60.60.20 PLAT/LH2 domain 1248 1365 7.9E-26 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 1492 1666 8.8E-18 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 1667 1795 3.1E-37 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 2177 2304 1.4E-33 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 1804 1922 2.4E-33 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 443 595 1.6E-32 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 2305 2425 4.0E-27 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 1366 1491 2.2E-36 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 726 848 4.1E-37 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 597 720 1.7E-30 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 2052 2176 1.3E-40 -
Gene3D G3DSA:2.40.180.10 Catalase core domain 980 1109 1.1E-32 -
SMART SM00320 WD40_4 294 361 37.0 IPR001680
SMART SM00308 LH2_4 1944 2059 7.4E-6 IPR001024
SMART SM00308 LH2_4 865 982 1.5E-5 IPR001024
SMART SM00308 LH2_4 1815 1934 2.3E-4 IPR001024
SMART SM00308 LH2_4 996 1117 0.0029 IPR001024
SMART SM00308 LH2_4 740 857 6.8E-6 IPR001024
SMART SM00308 LH2_4 1247 1370 7.3E-4 IPR001024
SMART SM00308 LH2_4 2320 2438 5.4E-4 IPR001024
SMART SM00308 LH2_4 2069 2177 1.3E-8 IPR001024
SMART SM00308 LH2_4 612 738 7.3E-5 IPR001024
SMART SM00320 WD40_4 367 407 0.66 IPR001680
SMART SM00320 WD40_4 115 155 1.5E-5 IPR001680
SMART SM00320 WD40_4 200 239 0.14 IPR001680
SMART SM00308 LH2_4 1685 1800 1.4E-5 IPR001024
SMART SM00320 WD40_4 243 282 9.3 IPR001680
SMART SM00308 LH2_4 1125 1241 6.0E-5 IPR001024
SMART SM00308 LH2_4 1377 1493 4.2E-5 IPR001024
SMART SM00308 LH2_4 486 605 5.1E-4 IPR001024
SMART SM00320 WD40_4 158 196 2.3 IPR001680
SMART SM00320 WD40_4 24 63 0.53 IPR001680
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. 38 72 9.739832 IPR001680
ProSiteProfiles PS50095 PLAT domain profile. 1944 2059 30.252869 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 2196 2311 28.296215 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 996 1115 23.388004 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 1685 1801 29.689087 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 865 985 35.127918 IPR001024
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. 122 164 9.372231 IPR001680
ProSiteProfiles PS50095 PLAT domain profile. 1377 1496 31.380432 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 2320 2435 24.449238 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 1507 1674 14.102197 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 1815 1930 29.125305 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 2069 2184 34.398319 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 486 603 32.242683 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 740 856 33.171265 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 1125 1240 32.541157 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 612 729 22.293606 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 2501 2617 22.757896 IPR001024
ProSiteProfiles PS50095 PLAT domain profile. 1247 1373 27.699272 IPR001024
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 50 64 - IPR019775
MobiDBLite mobidb-lite consensus disorder prediction 2698 2728 - -
MobiDBLite mobidb-lite consensus disorder prediction 2746 2810 - -
MobiDBLite mobidb-lite consensus disorder prediction 2635 2663 - -
Coils Coil Coil 2626 2646 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G18060.1 transducin family protein / WD-40 repeat family protein. 0
RefSeq XP_002946691.1 hypothetical protein VOLCADRAFT_86901 [Volvox carteri f. nagariensis] 0
Swiss-Prot Q8IVV2 Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOXHD1 PE=2 SV=4 0
TrEMBL A0A7S3VHN2 WD_REPEATS_REGION domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS608 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Dunaliellaceae Dunaliella salina 11 Dusal.0035s00014.v1.0, Dusal.0041s00007.v1.0 ...
Dusal.0100s00008.v1.0, Dusal.0100s00009.v1.0, Dusal.0100s00010.v1.0, Dusal.0177s00014.v1.0, Dusal.0177s00015.v1.0, Dusal.0285s00020.v1.0, Dusal.0285s00022.v1.0, Dusal.0424s00009.v1.0, Dusal.0491s00003.v1.0
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.