Basic Information
Locus ID:
Dusal.0159s00016.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold159 | 442868 | 453699 | + | Dusal.0159s00016.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 59,291.69 Da | 47.94 | 83.30 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00268 | DEADc | 214 | 425 | 5.02688E-84 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 227 | 417 | 4.6E-44 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 407 | 547 | 7.62E-8 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 196 | 425 | 1.88E-59 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 433 | 552 | 2.6E-11 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 164 | 432 | 8.8E-73 | IPR027417 |
| SMART | SM00487 | ultradead3 | 222 | 442 | 8.6E-52 | IPR014001 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 234 | 430 | 27.309015 | IPR014001 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 203 | 231 | 9.161757 | IPR014014 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 374 | 382 | - | IPR000629 |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01540.1 | DEAD box RNA helicase 1. RNA HELICASE DRH1 | 0 |
| RefSeq | XP_013898125.1 | DEAD-box ATP-dependent RNA helicase 14 [Monoraphidium neglectum] | 0 |
| Q5VQL1 | DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6S8P1E9 | RNA helicase OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS20548 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology