HalophFGD

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Basic Information
Locus ID: Dusal.0154s00013.v1.0
Species & Taxonomic ID: Dunaliella salina & 3046
Genome Assembly: v1.0
Description: spindle assembly checkpoint
Maps and Mapping Data
Chromosome Start End Strand ID
scaffold154 245813 300160 + Dusal.0154s00013.v1.0
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.01 226,820.92 Da 62.33 54.68 -1.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07926 TPR/MLP1/MLP2-like protein 312 425 1.3E-11 IPR012929
MobiDBLite mobidb-lite consensus disorder prediction 1362 1383 - -
MobiDBLite mobidb-lite consensus disorder prediction 1307 1321 - -
MobiDBLite mobidb-lite consensus disorder prediction 1245 1298 - -
MobiDBLite mobidb-lite consensus disorder prediction 1994 2104 - -
MobiDBLite mobidb-lite consensus disorder prediction 1188 1203 - -
MobiDBLite mobidb-lite consensus disorder prediction 940 956 - -
MobiDBLite mobidb-lite consensus disorder prediction 1211 1226 - -
MobiDBLite mobidb-lite consensus disorder prediction 1455 1476 - -
MobiDBLite mobidb-lite consensus disorder prediction 1821 1843 - -
MobiDBLite mobidb-lite consensus disorder prediction 1856 1888 - -
MobiDBLite mobidb-lite consensus disorder prediction 1035 1049 - -
MobiDBLite mobidb-lite consensus disorder prediction 1781 1795 - -
MobiDBLite mobidb-lite consensus disorder prediction 990 1004 - -
MobiDBLite mobidb-lite consensus disorder prediction 1424 1438 - -
MobiDBLite mobidb-lite consensus disorder prediction 1664 1712 - -
MobiDBLite mobidb-lite consensus disorder prediction 1050 1187 - -
MobiDBLite mobidb-lite consensus disorder prediction 960 977 - -
MobiDBLite mobidb-lite consensus disorder prediction 824 839 - -
MobiDBLite mobidb-lite consensus disorder prediction 840 855 - -
MobiDBLite mobidb-lite consensus disorder prediction 1346 1361 - -
MobiDBLite mobidb-lite consensus disorder prediction 904 932 - -
MobiDBLite mobidb-lite consensus disorder prediction 1322 1345 - -
MobiDBLite mobidb-lite consensus disorder prediction 824 1946 - -
MobiDBLite mobidb-lite consensus disorder prediction 1439 1454 - -
Coils Coil Coil 257 305 - -
Coils Coil Coil 1427 1454 - -
Coils Coil Coil 397 424 - -
Coils Coil Coil 1030 1204 - -
Coils Coil Coil 621 648 - -
Coils Coil Coil 529 563 - -
Coils Coil Coil 782 851 - -
Coils Coil Coil 728 762 - -
Coils Coil Coil 316 336 - -
Coils Coil Coil 142 169 - -
Coils Coil Coil 341 385 - -
Coils Coil Coil 462 489 - -
Coils Coil Coil 195 229 - -
Coils Coil Coil 61 88 - -
Coils Coil Coil 1311 1393 - -
Gene Ontology
Biological Process:
GO:0006606 (protein import into nucleus)
KEGG Pathway
KO Term:
K09291 (nucleoprotein TPR)
Pathway:
ko03013 (Nucleocytoplasmic transport) map03013 (Nucleocytoplasmic transport)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_042919572.1 uncharacterized protein CHLRE_11g468356v5 [Chlamydomonas reinhardtii] 0
TrEMBL A0A7S3R3P4 TPR_MLP1_2 domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS15975 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Anacardiaceae Pistacia vera 1 pistato.v30222490
Dunaliellaceae Dunaliella salina 10 Dusal.0048s00001.v1.0, Dusal.0048s00002.v1.0 ...
Dusal.0154s00013.v1.0, Dusal.0183s00005.v1.0, Dusal.0183s00007.v1.0, Dusal.0960s00001.v1.0, Dusal.0960s00002.v1.0, Dusal.0960s00003.v1.0, Dusal.0979s00003.v1.0, Dusal.1099s00003.v1.0
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.