Basic Information
Locus ID:
Dusal.0146s00021.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold146 | 374195 | 396789 | - | Dusal.0146s00021.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 80,685.33 Da | 44.30 | 75.71 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 440 | 746 | 1.51304E-109 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 535 | 572 | 9.1E-10 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 499 | 530 | 2.9E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 576 | 614 | 1.4E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 708 | 745 | 2.6E-11 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 439 | 476 | 2.4E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 621 | 656 | 5.4E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 661 | 703 | 2.4E-8 | IPR001680 |
| Pfam | PF13676 | TIR domain | 47 | 137 | 2.5E-9 | IPR000157 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 45 | 111 | 4.71E-9 | IPR035897 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 437 | 745 | 4.76E-97 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 577 | 663 | 4.4E-30 | IPR015943 |
| Gene3D | G3DSA:3.40.50.10140 | - | 6 | 148 | 6.1E-12 | IPR035897 |
| Gene3D | G3DSA:2.130.10.10 | - | 341 | 576 | 7.5E-53 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 664 | 749 | 3.7E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 437 | 476 | 4.9E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 707 | 746 | 9.8E-14 | IPR001680 |
| SMART | SM00320 | WD40_4 | 617 | 656 | 6.3E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 533 | 572 | 1.7E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 490 | 530 | 4.7E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 660 | 703 | 6.6E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 575 | 614 | 1.4E-11 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 624 | 659 | 16.189545 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 540 | 581 | 16.991583 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 444 | 480 | 14.239212 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 582 | 623 | 16.824492 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 582 | 617 | 12.894674 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 498 | 531 | 13.47467 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 498 | 539 | 17.359182 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 444 | 485 | 18.060965 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 540 | 577 | 13.290127 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 624 | 659 | 13.31649 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 714 | 749 | 15.900114 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 714 | 749 | 17.793619 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 601 | 615 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 517 | 531 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 643 | 657 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 559 | 573 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 517 | 531 | 1.3E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 463 | 477 | 1.3E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 643 | 657 | 1.3E-8 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| Coils | Coil | Coil | 357 | 401 | - | - |
| Coils | Coil | Coil | 273 | 349 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002958790.1 | hypothetical protein VOLCADRAFT_100103 [Volvox carteri f. nagariensis] | 0 |
| Q54PE0 | Periodic tryptophan protein 2 homolog OS=Dictyostelium discoideum OX=44689 GN=pwp2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7R9VEH2 | TIR domain-containing protein OS=Chlamydomonas euryale OX=1486919 GN=CEUR00632_LOCUS11023 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |