Basic Information
Locus ID:
Dusal.0141s00020.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
GAF domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold141 | 486399 | 495172 | - | Dusal.0141s00020.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 31,333.18 Da | 47.49 | 78.50 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01590 | GAF domain | 117 | 248 | 2.3E-8 | IPR003018 |
| SUPERFAMILY | SSF55781 | GAF domain-like | 116 | 261 | 4.17E-24 | - |
| Gene3D | G3DSA:3.30.450.40 | - | 99 | 264 | 1.9E-18 | IPR029016 |
| SMART | SM00065 | gaf_1 | 115 | 259 | 4.7E-5 | IPR003018 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 64 | - | - |
| Coils | Coil | Coil | 255 | 275 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042915069.1 | uncharacterized protein CHLRE_17g739250v5 [Chlamydomonas reinhardtii] | 0 |
| Q9I0R8 | Cyclic di-GMP phosphodiesterase PA2567 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA2567 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3VQR4 | GAF domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS15580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 9 | Dusal.0022s00024.v1.0, Dusal.0119s00002.v1.0 ... |