Basic Information
Locus ID:
Dusal.0136s00025.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold136 | 455231 | 511320 | + | Dusal.0136s00025.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 72,247.36 Da | 55.32 | 79.93 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 95 | 133 | 0.0033 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 597 | 636 | 3.5E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 72 | 678 | 4.39E-39 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 8 | 218 | 3.3E-21 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 449 | 681 | 2.3E-27 | IPR015943 |
| SMART | SM00320 | WD40_4 | 92 | 133 | 9.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 639 | 678 | 5.5E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 595 | 636 | 0.021 | IPR001680 |
| SMART | SM00320 | WD40_4 | 541 | 592 | 21.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 141 | 176 | 3.6 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 99 | 137 | 8.887423 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 99 | 142 | 11.009724 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 120 | 134 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 488 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042927349.1 | uncharacterized protein CHLRE_02g100800v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7S3QVB1 | WD_REPEATS_REGION domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS8965 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg32892 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25173 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah037057, Ah037058 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g042780 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg30160, Sbi_jg43604 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18298 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00004059 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl66047, Sgl70364 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000019882, gene:ENSEOMG00000034265 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0018430, CQ.Regalona.r1.1BG0003980 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30259750 |
| Apiaceae | Apium graveolens | 1 | AgUnG01343 |
| Arecaceae | Cocos nucifera | 3 | COCNU_01G000600, COCNU_04G010020, COCNU_14G007390 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103723722 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2088.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G20638 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G29830.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10027356m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g27640.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g011220.2N, BniB05g007880.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0821 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0845 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g09450 |
| Dunaliellaceae | Dunaliella salina | 5 | Dusal.0051s00019.v1.0, Dusal.0103s00026.v1.0 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g30150 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1279 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00039599 |
| Poaceae | Echinochloa crus-galli | 3 | AH04.2120, BH04.2203, CH04.2537 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0691780, gene-QOZ80_9BG0709270 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0363150.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_065660 |
| Poaceae | Oryza coarctata | 2 | Oco21G009380, Oco22G010780 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g43890.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G231600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0103410 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr07G014610, Chr31G008020 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G230500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG026360, gene_TRIDC4BG024920 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G165700.1, TraesCS4B02G144300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb165440_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-37626, nbis-gene-37627, nbis-gene-46011 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g18256, Zma_g18257, Zma_g18267, Zma_g19125 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.2518, evm.TU.LG17.1561 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g20940, gene.Posoc05g10640 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.60383.4, evm.TU.60384.4 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-12976 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12790 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16932 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000033l.381 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00014747 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-8161 |
| Salicaceae | Populus euphratica | 1 | populus_peu11887 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636898 |
| Solanaceae | Solanum chilense | 1 | SOLCI006027900 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107005340, gene-LOC107023996 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.5088_chr03_+, gene_18202 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G0490 |
| Zosteraceae | Zostera marina | 1 | Zosma03g19170.v3.1 |