Basic Information
Locus ID:
Dusal.0130s00011.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
MYND finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold130 | 190282 | 202663 | + | Dusal.0130s00011.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 51,387.38 Da | 55.03 | 66.63 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00023 | Ankyrin repeat | 126 | 152 | 1.4E-4 | IPR002110 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 30 | 113 | 2.9E-11 | IPR020683 |
| Pfam | PF01753 | MYND finger | 441 | 479 | 1.1E-6 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 438 | 483 | 1.73E-10 | - |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 23 | 183 | 2.98E-34 | IPR036770 |
| Gene3D | G3DSA:6.10.140.2220 | - | 434 | 484 | 1.7E-10 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 91 | 196 | 7.5E-19 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 5 | 90 | 2.0E-18 | IPR036770 |
| SMART | SM00248 | ANK_2a | 84 | 113 | 7.3E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 51 | 80 | 6.1E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 13 | 46 | 53.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 125 | 154 | 0.003 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 84 | 113 | 10.338512 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 51 | 81 | 10.948734 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 125 | 151 | 12.1018 | IPR002110 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 441 | 479 | 10.902658 | IPR002893 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 13 | 49 | 8.60279 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 51 | 83 | 12.075089 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 125 | 151 | 12.063051 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 84 | 116 | 11.24708 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 203 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3QYZ8 | MYND-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS12435 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0005s00050.v1.0, Dusal.0043s00004.v1.0 ... |