Basic Information
Locus ID:
Dusal.0126s00007.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
determination of stomach left/right asymmetry
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold126 | 162541 | 195583 | + | Dusal.0126s00007.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 161,057.89 Da | 48.60 | 79.89 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13424 | Tetratricopeptide repeat | 1065 | 1121 | 8.2E-8 | - |
| Pfam | PF13424 | Tetratricopeptide repeat | 1336 | 1404 | 1.3E-9 | - |
| SUPERFAMILY | SSF48452 | TPR-like | 1296 | 1439 | 1.23E-16 | IPR011990 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 620 | 836 | 3.01E-5 | IPR027417 |
| SUPERFAMILY | SSF48452 | TPR-like | 1083 | 1227 | 5.82E-11 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 1265 | 1449 | 1.4E-34 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 1053 | 1247 | 5.5E-32 | IPR011990 |
| SMART | SM00028 | tpr_5 | 1336 | 1369 | 170.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 1378 | 1411 | 220.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 1296 | 1329 | 73.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 1089 | 1122 | 11.0 | IPR019734 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 605 | 620 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 596 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 519 | - | - |
| Coils | Coil | Coil | 451 | 595 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A835XR55 | AAA domain-containing protein OS=Edaphochlamys debaryana OX=47281 GN=HYH03_014015 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 25 | Dusal.0002s00013.v1.0, Dusal.0075s00019.v1.0 ... |