Basic Information
Locus ID:
Dusal.0124s00008.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
positive regulation of MDA-5 signaling pathway
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold124 | 128421 | 143234 | + | Dusal.0124s00008.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 21,734.44 Da | 24.99 | 95.31 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 16 | 111 | 4.5E-14 | IPR020683 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 115 | 179 | 1.0E-13 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 12 | 201 | 3.07E-49 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 111 | 206 | 3.9E-30 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 9 | 110 | 2.0E-23 | IPR036770 |
| SMART | SM00248 | ANK_2a | 115 | 144 | 3.1E-6 | IPR002110 |
| SMART | SM00248 | ANK_2a | 82 | 111 | 0.0017 | IPR002110 |
| SMART | SM00248 | ANK_2a | 148 | 177 | 6.2E-6 | IPR002110 |
| SMART | SM00248 | ANK_2a | 46 | 75 | 3.1E-6 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 46 | 78 | 13.7044 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 82 | 114 | 12.87639 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 148 | 180 | 11.78128 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 115 | 147 | 13.73111 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 115 | 143 | 13.310026 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 148 | 180 | 10.418106 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 46 | 74 | 13.310026 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 82 | 110 | 11.930395 | - |
| PRINTS | PR01415 | Ankyrin repeat signature | 47 | 62 | 2.7E-7 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 98 | 112 | 2.7E-7 | IPR002110 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A1V9Y451 | Ankyrin repeat domain-containing protein 50-like (Fragment) OS=Thraustotheca clavata OX=74557 GN=THRCLA_12065 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |