Basic Information
Locus ID:
Dusal.0121s00005.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Ubiquitin fusion degradation protein UFD1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold121 | 104977 | 117853 | - | Dusal.0121s00005.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 35,406.01 Da | 51.01 | 65.08 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 12 | 182 | 2.5E-72 | IPR004854 |
| SUPERFAMILY | SSF54585 | Cdc48 domain 2-like | 108 | 173 | 4.9E-5 | IPR029067 |
| Gene3D | G3DSA:3.10.330.10 | - | 107 | 180 | 1.1E-31 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 4 | 105 | 3.8E-37 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 224 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_005845377.1 | hypothetical protein CHLNCDRAFT_136896 [Chlorella variabilis] | 0 |
| Q92890 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapiens OX=9606 GN=UFD1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A7S3QKJ8 | Ubiquitin fusion degradation protein 1 OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS337 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology