Basic Information
Locus ID:
Dusal.0120s00020.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
protein ubiquitination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold120 | 411390 | 422550 | + | Dusal.0120s00020.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 123,872.05 Da | 51.44 | 80.47 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 1149 | 1188 | 1.04469E-5 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 34 | 139 | 8.8E-13 | IPR020683 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 147 | 272 | 2.0E-9 | IPR020683 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1148 | 1187 | 3.26E-6 | - |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 34 | 308 | 6.39E-36 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 27 | 164 | 7.6E-27 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1127 | 1194 | 3.1E-8 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 177 | 312 | 1.5E-13 | IPR036770 |
| SMART | SM00248 | ANK_2a | 64 | 92 | 200.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 142 | 173 | 0.79 | IPR002110 |
| SMART | SM00248 | ANK_2a | 108 | 137 | 1.4E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 204 | 233 | 4.6E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 249 | 278 | 140.0 | IPR002110 |
| SMART | SM00184 | ring_2 | 1149 | 1189 | 0.004 | IPR001841 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 108 | 134 | 9.303788 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1149 | 1187 | 9.346889 | IPR001841 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 204 | 236 | 11.62102 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 204 | 233 | 11.187517 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 108 | 140 | 10.579329 | IPR002110 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 1164 | 1173 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1108 | 1145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 953 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 688 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 667 | 685 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1122 | 1140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 973 | 1001 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28840.1 | XB3 ortholog 1 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_042924074.1 | uncharacterized protein CHLRE_06g287650v5 [Chlamydomonas reinhardtii] | 0 |
| Q94B55 | Putative E3 ubiquitin-protein ligase XBAT31 OS=Arabidopsis thaliana OX=3702 GN=XBAT31 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8J4BFB3 | RING-type domain-containing protein OS=Volvox africanus OX=51714 GN=Vafri_14847 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology