Basic Information
Locus ID:
Dusal.0117s00025.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Ankyrin repeat and SOCS box
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold117 | 475886 | 488024 | + | Dusal.0117s00025.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 18,896.97 Da | 45.09 | 75.37 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 79 | 146 | 1.1E-15 | IPR020683 |
| Pfam | PF00023 | Ankyrin repeat | 51 | 74 | 0.0096 | IPR002110 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 30 | 163 | 1.99E-37 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 121 | 165 | 2.2E-14 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 87 | 120 | 1.4E-11 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 4 | 86 | 2.5E-13 | IPR036770 |
| SMART | SM00248 | ANK_2a | 115 | 144 | 4.2E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 49 | 78 | 0.13 | IPR002110 |
| SMART | SM00248 | ANK_2a | 82 | 111 | 3.3E-5 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 115 | 146 | 11.426298 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 82 | 114 | 13.336557 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 115 | 147 | 12.475739 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 49 | 74 | 9.462976 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 82 | 114 | 14.719379 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 49 | 81 | 10.04513 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 131 | 145 | 7.0E-8 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 83 | 98 | 7.0E-8 | IPR002110 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |