Basic Information
Locus ID:
Dusal.0117s00007.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Belongs to the helicase family. RecQ subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold117 | 156236 | 186738 | - | Dusal.0117s00007.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 107,162.90 Da | 73.91 | 64.55 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD/DEAH box helicase | 27 | 130 | 4.9E-6 | IPR011545 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 192 | 295 | 8.9E-13 | IPR001650 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 165 | 353 | 2.11E-39 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 7 | 310 | 1.1E-21 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 166 | 383 | 3.2E-52 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 5 | 140 | 4.3E-34 | IPR027417 |
| SMART | SM00490 | helicmild6 | 215 | 296 | 2.2E-21 | IPR001650 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 188 | 336 | 17.524902 | IPR001650 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 778 | 820 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 721 | 750 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 732 | 750 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 927 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 676 | 709 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 973 | - | - |
| Coils | Coil | Coil | 494 | 532 | - | - |
| Coils | Coil | Coil | 971 | 973 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35740.1 | DEAD/DEAH box RNA helicase family protein . Encodes RECQ3, an ATP-dependent helicase. | 0 |
| RefSeq | XP_042916188.1 | uncharacterized protein CHLRE_16g673393v5 [Chlamydomonas reinhardtii] | 0 |
| Q9FT72 | ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4GM28 | ATP-dependent DNA helicase OS=Volvox reticuliferus OX=1737510 GN=Vretifemale_14627 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology