Basic Information
Locus ID:
Dusal.0101s00002.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
F-box WD repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold101 | 39870 | 47976 | + | Dusal.0101s00002.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 20,536.52 Da | 19.98 | 81.29 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 99 | 133 | 0.0045 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 48 | 86 | 1.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 11 | 44 | 0.006 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 16 | 158 | 4.71E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 7 | 172 | 3.2E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 47 | 86 | 2.0E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 3 | 44 | 0.021 | IPR001680 |
| SMART | SM00320 | WD40_4 | 89 | 133 | 0.19 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 54 | 91 | 9.836508 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 101 | 142 | 9.505904 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 19 | 53 | 10.942887 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 54 | 95 | 12.914561 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 73 | 87 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 120 | 134 | 4.5E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 31 | 45 | 4.5E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 73 | 87 | 4.5E-5 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| P87060 | WD repeat-containing protein pop1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pop1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836BVA7 | WD_REPEATS_REGION domain-containing protein OS=Edaphochlamys debaryana OX=47281 GN=HYH03_012613 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 24 | Dusal.0003s00030.v1.0, Dusal.0015s00021.v1.0 ... |