Basic Information
Locus ID:
Dusal.0091s00022.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold91 | 396141 | 445749 | - | Dusal.0091s00022.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 68,306.83 Da | 54.73 | 76.73 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 169 | 212 | 7.42156E-18 | - |
| Pfam | PF04564 | U-box domain | 165 | 237 | 1.5E-11 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 153 | 237 | 7.51E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 158 | 237 | 3.2E-22 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 168 | 233 | 3.3E-17 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 164 | 240 | 28.033789 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 606 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 433 | - | - |
| Coils | Coil | Coil | 253 | 280 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01830.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_002956647.1 | hypothetical protein VOLCADRAFT_119489 [Volvox carteri f. nagariensis] | 0 |
| Q9LZW3 | U-box domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=PUB16 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7S0RE77 | U-box domain-containing protein (Fragment) OS=Chlamydomonas leiostraca OX=1034604 GN=CLEI1391_LOCUS6697 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0091s00022.v1.0 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.4HG0352790.1, HORVU.MOREX.r3.6HG0592860.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_015740 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g13780.1 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG069030 |
| Poaceae | Triticum aestivum | 1 | TraesCS6B02G370800.1 |
| Salicaceae | Populus euphratica | 1 | populus_peu04394 |