Basic Information
Locus ID:
Dusal.0087s00011.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold87 | 285786 | 329172 | - | Dusal.0087s00011.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 187,817.27 Da | 42.82 | 91.62 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 1227 | 1513 | 6.05474E-80 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 1563 | 1600 | 1.2E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1268 | 1303 | 4.8E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1440 | 1471 | 2.3E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1309 | 1343 | 0.0027 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1528 | 1558 | 0.0025 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1392 | 1429 | 3.8E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1357 | 1384 | 0.0084 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1477 | 1513 | 2.6E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1228 | 1261 | 2.4E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1228 | 1354 | 9.7E-31 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1313 | 1608 | 4.58E-60 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1352 | 1527 | 1.7E-46 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1528 | 1654 | 3.0E-23 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1192 | 1351 | 2.4E-40 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1516 | 1558 | 3.0E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1432 | 1471 | 2.3E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1346 | 1384 | 7.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1561 | 1600 | 1.6E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1224 | 1261 | 6.1E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1389 | 1430 | 4.8E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1264 | 1303 | 5.1E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1306 | 1343 | 3.4E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1474 | 1513 | 8.4E-8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1313 | 1345 | 12.413288 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1481 | 1515 | 11.154684 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1396 | 1431 | 8.57106 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1568 | 1609 | 14.017362 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1313 | 1345 | 10.337415 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1439 | 1473 | 10.442869 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1396 | 1439 | 10.34136 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1231 | 1266 | 11.339228 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1568 | 1601 | 11.049229 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1352 | 1388 | 9.045603 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1352 | 1388 | 10.775796 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1271 | 1305 | 12.710129 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1481 | 1522 | 13.750016 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1526 | 1567 | 10.107432 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1271 | 1305 | 15.420926 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1439 | 1480 | 12.914561 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1231 | 1270 | 14.61889 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1371 | 1385 | - | IPR019775 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 596 | 608 | - | IPR018247 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1330 | 1344 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1290 | 1304 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1458 | 1472 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1248 | 1262 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1330 | 1344 | 3.9E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1290 | 1304 | 3.9E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1248 | 1262 | 3.9E-7 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1660 | 1683 | - | - |
| Coils | Coil | Coil | 465 | 506 | - | - |
| Coils | Coil | Coil | 77 | 108 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| Q6L4F8 | Small ribosomal subunit protein RACK1y OS=Oryza sativa subsp. japonica OX=39947 GN=RACK1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3RA22 | NACHT domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS22146 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 24 | Dusal.0003s00030.v1.0, Dusal.0015s00021.v1.0 ... |