Basic Information
Locus ID:
Dusal.0086s00016.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
MYND finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold86 | 266187 | 268976 | + | Dusal.0086s00016.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 32,027.45 Da | 62.28 | 56.80 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 264 | 302 | 7.9E-8 | IPR002893 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 1 | 52 | 1.76E-7 | IPR036770 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 261 | 305 | 4.36E-10 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 256 | 308 | 1.1E-10 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 1 | 44 | 7.0E-8 | IPR036770 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 264 | 302 | 11.300194 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 222 | - | - |
| Coils | Coil | Coil | 302 | 309 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3QYU9 | MYND-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS12441 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0005s00050.v1.0, Dusal.0043s00004.v1.0 ... |