Basic Information
Locus ID:
Dusal.0076s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold76 | 88773 | 109971 | - | Dusal.0076s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 37,207.69 Da | 43.33 | 85.76 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 173 | 207 | 7.3E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 26 | 242 | 6.11E-23 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 3 | 291 | 4.4E-26 | IPR015943 |
| SMART | SM00320 | WD40_4 | 63 | 100 | 38.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 170 | 208 | 8.9E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 130 | 167 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 22 | 60 | 7.5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 177 | 217 | 9.004632 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 28 | 69 | 10.34136 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 329 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042924447.1 | uncharacterized protein CHLRE_06g308000v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7R9VUP3 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Chlamydomonas euryale OX=1486919 GN=CEUR00632_LOCUS18304 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 3 | Dusal.0062s00013.v1.0, Dusal.0076s00003.v1.0 ... |