Basic Information
Locus ID:
Dusal.0075s00025.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold75 | 610058 | 632820 | + | Dusal.0075s00025.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 150,600.23 Da | 39.07 | 75.65 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 22 | 296 | 1.7E-28 | IPR036322 |
| SUPERFAMILY | SSF57997 | Tropomyosin | 669 | 915 | 3.66E-8 | - |
| Gene3D | G3DSA:1.10.287.1490 | - | 405 | 570 | 2.7E-5 | - |
| Gene3D | G3DSA:1.10.287.1490 | - | 804 | 975 | 5.7E-8 | - |
| Gene3D | G3DSA:1.10.287.1490 | - | 571 | 735 | 8.1E-6 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 147 | 326 | 2.5E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 19 | 146 | 1.8E-12 | IPR015943 |
| SMART | SM00320 | WD40_4 | 111 | 150 | 2.0E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 249 | 286 | 16.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 23 | 61 | 240.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 152 | 199 | 16.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 210 | 246 | 86.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 118 | 150 | 8.544697 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 118 | 150 | 10.14085 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1040 | 1120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 733 | 757 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1214 | 1247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 837 | 860 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 820 | 836 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1352 | 1392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1066 | 1106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 796 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 796 | 819 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1137 | 1158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1217 | 1235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 558 | - | - |
| Coils | Coil | Coil | 1017 | 1044 | - | - |
| Coils | Coil | Coil | 1318 | 1341 | - | - |
| Coils | Coil | Coil | 1283 | 1310 | - | - |
| Coils | Coil | Coil | 423 | 461 | - | - |
| Coils | Coil | Coil | 757 | 798 | - | - |
| Coils | Coil | Coil | 1126 | 1209 | - | - |
| Coils | Coil | Coil | 680 | 749 | - | - |
| Coils | Coil | Coil | 940 | 1009 | - | - |
| Coils | Coil | Coil | 515 | 602 | - | - |
| Coils | Coil | Coil | 806 | 935 | - | - |
| Coils | Coil | Coil | 617 | 669 | - | - |
| Coils | Coil | Coil | 487 | 507 | - | - |
| Coils | Coil | Coil | 334 | 407 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042927501.1 | uncharacterized protein CHLRE_02g110050v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7S3QMN0 | WD_REPEATS_REGION domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS2273 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Dusal.0075s00025.v1.0.