Basic Information
Locus ID:
Dusal.0075s00023.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Vesicle-associated protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold75 | 527283 | 542581 | + | Dusal.0075s00023.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 57,513.32 Da | 45.53 | 81.59 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 329 | 430 | 8.4E-17 | IPR000535 |
| SUPERFAMILY | SSF49354 | PapD-like | 329 | 455 | 1.07E-21 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 324 | 444 | 5.3E-22 | IPR013783 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 328 | 445 | 13.488385 | IPR000535 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_001693138.1 | uncharacterized protein CHLRE_03g196900v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7S3VQW3 | MSP domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS16890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 25 | Dusal.0002s00013.v1.0, Dusal.0075s00019.v1.0 ... |