Basic Information
Locus ID:
Dusal.0074s00008.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Secretory pathway protein Sec39
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold74 | 123444 | 221237 | + | Dusal.0074s00008.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 332,998.38 Da | 60.99 | 71.07 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| PRINTS | PR01217 | Proline rich extensin signature | 2756 | 2781 | 5.4E-11 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 2736 | 2753 | 5.4E-11 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 2714 | 2730 | 5.4E-11 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 2582 | 2594 | 5.4E-11 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 2642 | 2654 | 5.4E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 893 | 909 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2577 | 2596 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2903 | 2924 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1935 | 1970 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1085 | 1102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1604 | 1644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1257 | 1279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2358 | 2377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1604 | 1638 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1830 | 1861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1172 | 1204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2277 | 2439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1830 | 1851 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2114 | 2192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2170 | 2184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1177 | 1204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1244 | 1307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2850 | 2897 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1743 | 1787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1048 | 1113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1429 | 1453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2457 | 2488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1747 | 1767 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2597 | 2626 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 3025 | 3045 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2925 | 2947 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2799 | 2848 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 847 | 1010 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2123 | 2148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2007 | 2023 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2554 | 2947 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1931 | 2029 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1431 | 1450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2149 | 2169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2555 | 2571 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2695 | 2779 | - | - |
| Coils | Coil | Coil | 1435 | 1455 | - | - |
| Coils | Coil | Coil | 2125 | 2180 | - | - |
| Coils | Coil | Coil | 1833 | 1853 | - | - |
| Coils | Coil | Coil | 2430 | 2465 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3VUK5 | Nuclear pore complex protein Nup85 (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS22401 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2157 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_16250 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah010151 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g216590 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12361, Sbi_jg45978 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg20310 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005625 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl19170, Sgl56202, Sgl61697, Sgl64814, Sgl69274 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000019553, gene:ENSEOMG00000039126 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.9AG0017750 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30169110 |
| Arecaceae | Cocos nucifera | 1 | COCNU_15G005210 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103719812 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.1014.V1.1, AsparagusV1_03.1015.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G13635 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G24350.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10003502m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g22970.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g077250.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1652 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1787 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g08820 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0074s00008.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g10930 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-11662, nbisL1-mrna-11663 |
| Nitrariaceae | Nitraria sibirica | 4 | evm.TU.LG01.2484, evm.TU.LG01.2485, evm.TU.LG01.2486 ... |
| Plantaginaceae | Plantago ovata | 2 | Pov_00010989, Pov_00041764 |
| Plumbaginaceae | Limonium bicolor | 7 | Lb1G05406, Lb1G05407, Lb1G05439, Lb1G05440, Lb1G05441 ... |
| Poaceae | Echinochloa crus-galli | 5 | AH05.1, AH05.501, BH05.549, CH05.630, CH05.888 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0619580.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_025647 |
| Poaceae | Oryza coarctata | 2 | Oco23G004040, Oco24G003580 |
| Poaceae | Oryza sativa | 1 | LOC_Os12g13150.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_08G087500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0203066 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr04G024150, Chr06G026530, Chr06G026540, Chr06G026550 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G587600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG049760, gene_TRIDC6BG058220 |
| Poaceae | Triticum aestivum | 4 | TraesCS5B02G507000.1, TraesCS6A02G333100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb359130_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52016 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g24912 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.1580, evm.TU.LG14.834 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g12590 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_16_RagTag.672 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24832 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-18527 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19077 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000022l.170 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016121 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-178 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-10432 |
| Salicaceae | Populus euphratica | 6 | populus_peu27981, populus_peu27982, populus_peu27983 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132632126 |
| Solanaceae | Solanum chilense | 1 | SOLCI006441900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014591 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_3988 |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G2668 |
| Zosteraceae | Zostera marina | 1 | Zosma04g06270.v3.1 |