Basic Information
Locus ID:
Dusal.0068s00020.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold68 | 446351 | 456228 | - | Dusal.0068s00020.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 29,566.23 Da | 31.91 | 78.56 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 30 | 68 | 0.054 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 13 | 255 | 3.66E-21 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 4 | 264 | 2.1E-88 | IPR015943 |
| SMART | SM00320 | WD40_4 | 159 | 195 | 81.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 217 | 257 | 24.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 23 | 68 | 0.016 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_001695914.1 | uncharacterized protein CHLRE_16g672600v5 [Chlamydomonas reinhardtii] | 0 |
| A8J3F6 | Dynein axonemal assembly factor 10 OS=Chlamydomonas reinhardtii OX=3055 GN=dnaaf10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S2QTR2 | WD_REPEATS_REGION domain-containing protein OS=Chlamydomonas chlamydogama OX=225041 GN=CCHL1392_LOCUS543 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0068s00020.v1.0 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.Contig19.2 |