Basic Information
Locus ID:
Dusal.0061s00007.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold61 | 105934 | 133324 | - | Dusal.0061s00007.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.67 | 39,943.88 Da | 32.48 | 75.43 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 59 | 359 | 1.05254E-58 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 60 | 96 | 3.1E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 281 | 316 | 9.5E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 322 | 355 | 3.3E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 146 | 180 | 0.0011 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 102 | 138 | 0.0075 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 60 | 359 | 1.34E-57 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 107 | 248 | 6.1E-25 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 255 | 362 | 3.3E-30 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 50 | 106 | 1.5E-14 | IPR015943 |
| SMART | SM00320 | WD40_4 | 320 | 359 | 2.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 57 | 96 | 1.2E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 205 | 276 | 21.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 141 | 180 | 8.0E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 99 | 138 | 1.7E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 279 | 317 | 1.6E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 106 | 147 | 9.940341 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 285 | 326 | 11.678087 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 264 | 285 | 9.205141 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 64 | 101 | 14.318304 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 327 | 363 | 11.744925 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 64 | 105 | 17.994127 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 327 | 363 | 11.128319 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 148 | 189 | 13.482671 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 148 | 180 | 10.23196 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 285 | 320 | 9.177421 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 83 | 97 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 304 | 318 | 3.9E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 83 | 97 | 3.9E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 263 | 277 | 3.9E-8 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002949336.1 | hypothetical protein VOLCADRAFT_104273 [Volvox carteri f. nagariensis] | 0 |
| A8ILK1 | Cilia- and flagella-associated protein 52 OS=Chlamydomonas reinhardtii OX=3055 GN=CFAP52 PE=1 SV=1 | 0 | |
| TrEMBL | A0A250X016 | WD_REPEATS_REGION domain-containing protein OS=Chlamydomonas eustigma OX=1157962 GN=CEUSTIGMA_g3543.t1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0061s00007.v1.0 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG05.1266, evm.TU.LG12.496, evm.TU.LG19.367 |