Basic Information
Locus ID:
Dusal.0056s00002.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Cyclic nucleotide dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold56 | 29867 | 43330 | - | Dusal.0056s00002.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 80,897.32 Da | 39.35 | 87.17 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00038 | CAP_ED | 61 | 168 | 4.87345E-24 | IPR000595 |
| CDD | cd05572 | STKc_cGK | 382 | 665 | 3.28835E-143 | IPR035014 |
| CDD | cd00038 | CAP_ED | 186 | 297 | 1.14849E-26 | IPR000595 |
| Pfam | PF00069 | Protein kinase domain | 379 | 660 | 2.1E-61 | IPR000719 |
| Pfam | PF00027 | Cyclic nucleotide-binding domain | 80 | 167 | 3.0E-16 | IPR000595 |
| Pfam | PF00027 | Cyclic nucleotide-binding domain | 206 | 288 | 3.4E-17 | IPR000595 |
| SUPERFAMILY | SSF51206 | cAMP-binding domain-like | 173 | 294 | 5.11E-27 | IPR018490 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 683 | 4.78E-78 | IPR011009 |
| SUPERFAMILY | SSF51206 | cAMP-binding domain-like | 46 | 171 | 8.38E-27 | IPR018490 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 679 | 1.1E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 484 | 1.1E-23 | - |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 174 | 306 | 1.3E-31 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 35 | 173 | 2.3E-31 | IPR014710 |
| SMART | SM00100 | cnmp_10 | 61 | 184 | 1.5E-14 | IPR000595 |
| SMART | SM00100 | cnmp_10 | 186 | 312 | 2.4E-16 | IPR000595 |
| SMART | SM00220 | serkin_6 | 376 | 660 | 6.1E-74 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 376 | 660 | 43.594215 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 661 | 720 | 9.722353 | IPR000961 |
| ProSiteProfiles | PS50042 | cAMP/cGMP binding motif profile. | 61 | 183 | 25.559999 | IPR000595 |
| ProSiteProfiles | PS50042 | cAMP/cGMP binding motif profile. | 186 | 297 | 31.0308 | IPR000595 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 518 | 530 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 382 | 405 | - | IPR017441 |
| ProSitePatterns | PS00888 | Cyclic nucleotide-binding domain signature 1. | 213 | 229 | - | IPR018488 |
| ProSitePatterns | PS00889 | Cyclic nucleotide-binding domain signature 2. | 131 | 148 | - | IPR018488 |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 284 | 296 | 5.5E-13 | - |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 263 | 274 | 5.5E-13 | - |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 251 | 260 | 5.5E-13 | - |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 222 | 236 | 5.5E-13 | - |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 207 | 221 | 5.5E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_002950834.1 | hypothetical protein VOLCADRAFT_81219 [Volvox carteri f. nagariensis] | 0 |
| Q13237 | cGMP-dependent protein kinase 2 OS=Homo sapiens OX=9606 GN=PRKG2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3R8L1 | cGMP-dependent protein kinase OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS21064 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0024s00013.v1.0, Dusal.0056s00002.v1.0 |