Basic Information
Locus ID:
Dusal.0056s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold56 | 4749 | 16117 | - | Dusal.0056s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 23,687.00 Da | 49.42 | 65.74 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05495 | CHY zinc finger | 2 | 44 | 3.9E-8 | IPR008913 |
| Pfam | PF13445 | RING-type zinc-finger | 99 | 139 | 1.9E-7 | IPR027370 |
| Pfam | PF14599 | Zinc-ribbon | 150 | 207 | 7.2E-24 | IPR039512 |
| SUPERFAMILY | SSF57850 | RING/U-box | 98 | 146 | 1.34E-9 | - |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 2 | 34 | 2.22E-5 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 35 | 92 | 7.59E-18 | IPR037275 |
| Gene3D | G3DSA:2.20.28.10 | - | 175 | 209 | 5.0E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 83 | 174 | 1.6E-10 | IPR013083 |
| SMART | SM00184 | ring_2 | 99 | 141 | 1.8E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 99 | 142 | 11.825393 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 34 | 98 | 31.437849 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 1 | 32 | 11.992077 | IPR008913 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25560.4 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_002949777.1 | hypothetical protein VOLCADRAFT_59540 [Volvox carteri f. nagariensis] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7R9VHV3 | RING finger and CHY zinc finger domain-containing protein 1 OS=Chlamydomonas euryale OX=1486919 GN=CEUR00632_LOCUS13033 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology