Basic Information
Locus ID:
Dusal.0052s00012.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold52 | 195997 | 201662 | + | Dusal.0052s00012.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.53 | 18,548.14 Da | 51.12 | 85.50 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 3 | 165 | 3.94E-12 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 170 | 7.2E-13 | IPR015943 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1 | 43 | 10.475033 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 21 | 35 | - | IPR019775 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002947467.1 | hypothetical protein VOLCADRAFT_103424 [Volvox carteri f. nagariensis] | 0 |
| TrEMBL | A0A7S0S1B3 | WD_REPEATS_REGION domain-containing protein OS=Chlamydomonas leiostraca OX=1034604 GN=CLEI1391_LOCUS16919 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0052s00012.v1.0 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.Contig12.23 |