HalophFGD

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Basic Information
Locus ID: Dusal.0052s00003.v1.0
Species & Taxonomic ID: Dunaliella salina & 3046
Genome Assembly: v1.0
Short Name: GLT
Description: glutamate synthase
Maps and Mapping Data
Chromosome Start End Strand ID
scaffold52 22392 54356 - Dusal.0052s00003.v1.0
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.08 193,756.55 Da 33.19 82.83 -0.21
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00982 gltB_C 908 1161 4.89044E-134 IPR002489
CDD cd02808 GltS_FMN 607 860 5.58313E-73 IPR002932
Pfam PF01493 GXGXG motif 934 1112 6.8E-81 IPR002489
Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1414 1738 5.6E-24 IPR023753
Pfam PF00310 Glutamine amidotransferases class-II 1 179 2.5E-71 IPR017932
Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1298 1400 3.1E-23 IPR028261
Pfam PF04898 Glutamate synthase central domain 235 518 1.6E-106 IPR006982
Pfam PF01645 Conserved region in glutamate synthase 586 740 2.2E-44 IPR002932
Pfam PF01645 Conserved region in glutamate synthase 758 847 3.1E-36 IPR002932
SUPERFAMILY SSF56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases) 17 182 3.09E-57 IPR029055
SUPERFAMILY SSF51395 FMN-linked oxidoreductases 230 743 1.56E-143 -
SUPERFAMILY SSF46548 alpha-helical ferredoxin 1263 1423 2.2E-34 -
SUPERFAMILY SSF51971 Nucleotide-binding domain 1411 1683 7.18E-59 -
SUPERFAMILY SSF51395 FMN-linked oxidoreductases 760 887 6.71E-39 -
SUPERFAMILY SSF69336 Alpha subunit of glutamate synthase, C-terminal domain 900 1170 1.26E-89 IPR036485
Gene3D G3DSA:1.10.1060.10 - 1258 1411 1.1E-40 IPR009051
Gene3D G3DSA:3.60.20.10 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 191 2.6E-74 IPR029055
Gene3D G3DSA:3.50.50.60 - 1512 1682 6.7E-31 IPR036188
Gene3D G3DSA:3.20.20.70 Aldolase class I 746 896 1.6E-52 IPR013785
Gene3D G3DSA:2.160.20.60 - 904 1181 4.1E-104 IPR036485
Gene3D G3DSA:3.20.20.70 Aldolase class I 570 745 6.7E-62 IPR013785
Gene3D G3DSA:3.20.20.70 Aldolase class I 226 569 4.9E-130 IPR013785
Gene3D G3DSA:3.50.50.60 - 1412 1504 1.4E-13 IPR036188
TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1265 1749 2.8E-219 IPR006005
PRINTS PR00419 Adrenodoxin reductase family signature 1414 1436 2.6E-23 -
PRINTS PR00419 Adrenodoxin reductase family signature 1480 1490 2.6E-23 -
PRINTS PR00419 Adrenodoxin reductase family signature 1556 1570 2.6E-23 -
PRINTS PR00419 Adrenodoxin reductase family signature 1437 1450 2.6E-23 -
MobiDBLite mobidb-lite consensus disorder prediction 678 700 - -
Gene Ontology
Biological Process:
GO:0006537 (glutamate biosynthetic process) GO:0008152 (metabolic process)
Molecular Function:
GO:0003824 (catalytic activity) GO:0015930 (glutamate synthase activity) GO:0016491 (oxidoreductase activity) GO:0016638 (oxidoreductase activity, acting on the CH-NH2 group of donors) GO:0016639 (oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor) GO:0051536 (iron-sulfur cluster binding)
KEGG Pathway
KO Term:
K00264 (glutamate synthase (NADH) [EC:1.4.1.14])
Pathway:
ko00250 (Alanine, aspartate and glutamate metabolism) map00250 (Alanine, aspartate and glutamate metabolism) ko00910 (Nitrogen metabolism) map00910 (Nitrogen metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments) ko01230 (Biosynthesis of amino acids) map01230 (Biosynthesis of amino acids)
Reaction:
R00093 (2 L-Glutamate + NAD+ <=> L-Glutamine + 2-Oxoglutarate + NADH + H+) R00114 (2 L-Glutamate + NADP+ <=> L-Glutamine + 2-Oxoglutarate + NADPH + H+) R00248 (L-Glutamate + NADP+ + H2O <=> 2-Oxoglutarate + Ammonia + NADPH + H+)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G53460.1 NADH-dependent glutamate synthase 1. NADH-dependent glutamate synthase 0
RefSeq XP_042917758.1 uncharacterized protein CHLRE_13g592200v5 [Chlamydomonas reinhardtii] 0
Swiss-Prot Q9LV03 Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLT1 PE=1 SV=2 0
TrEMBL A0A6S8MVP8 glutamate synthase (NADH) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS17112 PE=3 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 2 jg13893, jg2196
Aizoaceae Mesembryanthemum crystallinum 1 gene_3295
Amaranthaceae Atriplex hortensis 1 Ah018647
Amaranthaceae Beta vulgaris 1 BVRB_3g052140
Amaranthaceae Salicornia bigelovii 2 Sbi_jg15107, Sbi_jg55939
Amaranthaceae Salicornia europaea 1 Seu_jg26420
Amaranthaceae Suaeda aralocaspica 1 GOSA_00020044
Amaranthaceae Suaeda glauca 5 Sgl01374, Sgl01440, Sgl01441, Sgl06449, Sgl06528
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000000510, gene:ENSEOMG00000031859 ...
gene:ENSEOMG00000043885
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.3AG0004880, CQ.Regalona.r1.3BG0004920
Anacardiaceae Pistacia vera 1 pistato.v30185180
Apiaceae Apium graveolens 2 Ag10G02525, AgUnG00467
Arecaceae Cocos nucifera 2 COCNU_03G013130, scaffold000561G000020
Arecaceae Phoenix dactylifera 2 gene-LOC103708325, gene-LOC103713334
Asparagaceae Asparagus officinalis 1 AsparagusV1_05.2833.V1.1
Asteraceae Flaveria trinervia 1 Ftri18G12439
Brassicaceae Arabidopsis thaliana 1 AT5G53460.1
Brassicaceae Eutrema salsugineum 1 Thhalv10012414m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp6g15593.v2.2
Brassicaceae Brassica nigra 1 BniB08g016600.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq09G1606
Casuarinaceae Casuarina glauca 1 Cgl09G1742
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno02g12650, gene.Cymno12g01560
Dunaliellaceae Dunaliella salina 1 Dusal.0052s00003.v1.0
Hydrocharitaceae Thalassia testudinum 2 gene.Thate03g24920, gene.Thate09g14990
Nitrariaceae Nitraria sibirica 1 evm.TU.LG01.2897
Plantaginaceae Plantago ovata 1 Pov_00041146
Plumbaginaceae Limonium bicolor 2 Lb0G37740, Lb7G32942
Poaceae Echinochloa crus-galli 5 AH02.2769, AH05.1457, BH02.2852, BH05.1626, CH02.3687
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_1AG0028780, gene-QOZ80_1BG0079010 ...
gene-QOZ80_5AG0363860, gene-QOZ80_5BG0411960
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.3HG0280530.1
Poaceae Lolium multiflorum 2 gene-QYE76_054594, gene-QYE76_054602
Poaceae Oryza coarctata 4 Oco01G017400, Oco02G017650, Oco09G016320, Oco10G016130
Poaceae Oryza sativa 2 LOC_Os01g48960.1, LOC_Os05g48200.1
Poaceae Paspalum vaginatum 3 gene-BS78_03G233100, gene-BS78_03G236800 ...
gene-BS78_09G229900
Poaceae Puccinellia tenuiflora 1 Pt_Chr0602367
Poaceae Sporobolus alterniflorus 3 Chr02G012560, Chr03G013590, Chr08G013750
Poaceae Thinopyrum elongatum 1 Tel3E01G442300
Poaceae Triticum dicoccoides 2 gene_TRIDC3AG039670, gene_TRIDC3BG044820
Poaceae Triticum aestivum 3 TraesCS3A02G266300.1, TraesCS3B02G299800.1 ...
TraesCS3D02G266400.1
Poaceae Zea mays 3 Zm00001eb156610_P002, Zm00001eb295220_P001 ...
Zm00001eb360480_P005
Poaceae Zoysia japonica 2 nbis-gene-12580, nbis-gene-26118
Poaceae Zoysia macrostachya 2 Zma_g10886, Zma_g8437
Portulacaceae Portulaca oleracea 1 evm.TU.LG06.1967
Posidoniaceae Posidonia oceanica 2 gene.Posoc08g13790, gene.Posoc09g09130
Rhizophoraceae Bruguiera sexangula 2 evm.TU.Scaffold_1_RagTag.622, evm.TU.Scaffold_2_RagTag.1648
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-3559, nbisL1-mrna-7507
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-2555, nbisL1-mrna-921
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-14013, nbisL1-mrna-5641
Rhizophoraceae Kandelia candel 2 evm.TU.utg000009l.314, evm.TU.utg000012l.386
Rhizophoraceae Kandelia obovata 2 Maker00005974, Maker00011451
Rhizophoraceae Rhizophora apiculata 2 nbisL1-mrna-2744, nbisL1-mrna-8412
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-16769, nbisL1-mrna-743
Salicaceae Populus euphratica 3 populus_peu28067, populus_peu29502, populus_peu29503
Solanaceae Lycium barbarum 1 gene-LOC132632063
Solanaceae Solanum pennellii 1 gene-LOC107013700
Tamaricaceae Reaumuria soongarica 1 gene_5260
Tamaricaceae Tamarix chinensis 1 TC06G1506
Zosteraceae Zostera marina 2 Zosma01g06270.v3.1, Zosma01g22390.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.