Basic Information
Locus ID:
Dusal.0051s00019.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
regulation of protein monoubiquitination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold51 | 408230 | 416831 | + | Dusal.0051s00019.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 27,845.09 Da | 22.90 | 79.61 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 6 | 50 | 0.081 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 180 | 214 | 0.024 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 97 | 128 | 1.7E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 226 | 256 | 0.0047 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 21 | 256 | 8.42E-45 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 163 | 256 | 1.9E-16 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 4 | 161 | 1.0E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 90 | 128 | 2.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 131 | 173 | 360.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 53 | 87 | 98.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 176 | 215 | 3.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 4 | 50 | 2.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 221 | 253 | 44.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 183 | 224 | 12.446706 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 36 | 59 | 8.637032 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 183 | 218 | 10.23196 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 96 | 137 | 15.287253 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 96 | 133 | 11.89286 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 202 | 216 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 115 | 129 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 202 | 216 | 1.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 37 | 51 | 1.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 115 | 129 | 1.0E-6 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A0F8YUC3 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=marine sediment metagenome OX=412755 GN=LCGC14_2854400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg32892 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25173 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah037057, Ah037058 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g042780 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg30160, Sbi_jg43604 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18298 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00004059 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl66047, Sgl70364 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000019882, gene:ENSEOMG00000034265 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0018430, CQ.Regalona.r1.1BG0003980 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30259750 |
| Apiaceae | Apium graveolens | 1 | AgUnG01343 |
| Arecaceae | Cocos nucifera | 3 | COCNU_01G000600, COCNU_04G010020, COCNU_14G007390 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103723722 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2088.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G20638 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G29830.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10027356m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g27640.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g011220.2N, BniB05g007880.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0821 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0845 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g09450 |
| Dunaliellaceae | Dunaliella salina | 5 | Dusal.0051s00019.v1.0, Dusal.0103s00026.v1.0 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g30150 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1279 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00039599 |
| Poaceae | Echinochloa crus-galli | 3 | AH04.2120, BH04.2203, CH04.2537 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0691780, gene-QOZ80_9BG0709270 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0363150.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_065660 |
| Poaceae | Oryza coarctata | 2 | Oco21G009380, Oco22G010780 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g43890.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G231600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0103410 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr07G014610, Chr31G008020 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G230500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG026360, gene_TRIDC4BG024920 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G165700.1, TraesCS4B02G144300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb165440_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-37626, nbis-gene-37627, nbis-gene-46011 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g18256, Zma_g18257, Zma_g18267, Zma_g19125 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.2518, evm.TU.LG17.1561 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g20940, gene.Posoc05g10640 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.60383.4, evm.TU.60384.4 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-12976 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12790 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16932 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000033l.381 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00014747 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-8161 |
| Salicaceae | Populus euphratica | 1 | populus_peu11887 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636898 |
| Solanaceae | Solanum chilense | 1 | SOLCI006027900 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107005340, gene-LOC107023996 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.5088_chr03_+, gene_18202 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G0490 |
| Zosteraceae | Zostera marina | 1 | Zosma03g19170.v3.1 |