Basic Information
Locus ID:
Dusal.0050s00015.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Tripartite motif containing 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold50 | 320113 | 325561 | - | Dusal.0050s00015.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 88,332.16 Da | 61.85 | 61.00 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 118 | 155 | 4.4E-5 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 111 | 172 | 2.29E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 68 | 178 | 1.7E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 118 | 155 | 1.4E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 118 | 156 | 11.22052 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 133 | 142 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 762 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 762 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 695 | 718 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 775 | 799 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 791 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 313 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002947179.1 | hypothetical protein VOLCADRAFT_103272 [Volvox carteri f. nagariensis] | 0 |
| TrEMBL | A0A7S3R1R7 | RING-type domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS14224 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Dusal.0050s00015.v1.0.