Basic Information
Locus ID:
Dusal.0047s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold47 | 3333 | 10614 | - | Dusal.0047s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 25,470.71 Da | 60.06 | 76.53 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 87 | 131 | 2.32149E-28 | - |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 89 | 129 | 6.5E-8 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 81 | 142 | 3.53E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 33 | 145 | 2.9E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 89 | 129 | 5.3E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 89 | 130 | 12.917115 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 104 | 113 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 184 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19310.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_005852253.1 | hypothetical protein CHLNCDRAFT_33679 [Chlorella variabilis] | 0 |
| Q99942 | E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3QTB6 | RING-type E3 ubiquitin transferase OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS6809 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology