Basic Information
Locus ID:
Dusal.0043s00004.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
MYND finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold43 | 136229 | 153817 | + | Dusal.0043s00004.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 34,989.55 Da | 55.16 | 67.37 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 256 | 310 | 9.68318E-6 | - |
| Pfam | PF01753 | MYND finger | 22 | 62 | 2.2E-11 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 20 | 66 | 3.14E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 251 | 315 | 3.57E-9 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 14 | 70 | 1.2E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 242 | 317 | 8.1E-9 | IPR013083 |
| SMART | SM00184 | ring_2 | 256 | 309 | 0.0081 | IPR001841 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 22 | 62 | 11.784152 | IPR002893 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 256 | 310 | 10.232069 | IPR001841 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 22 | 62 | - | IPR002893 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002949943.1 | hypothetical protein VOLCADRAFT_90276 [Volvox carteri f. nagariensis] | 0 |
| Q54ZX8 | SET and MYND domain-containing protein DDB_G0277331 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277331 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7S3VJY2 | MYND-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS5622 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0005s00050.v1.0, Dusal.0043s00004.v1.0 ... |