Basic Information
Locus ID:
Dusal.0043s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Short Name:
RPS20
Description:
ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold43 | 68190 | 73115 | + | Dusal.0043s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 13,329.49 Da | 30.20 | 96.61 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 23 | 117 | 3.5E-30 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 21 | 118 | 9.68E-33 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 6 | 120 | 1.1E-50 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 23 | 117 | 1.7E-42 | IPR027486 |
| TIGRFAM | TIGR01046 | uS10_euk_arch: ribosomal protein uS10 | 20 | 118 | 4.1E-43 | IPR005729 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 21 | 34 | 1.4E-13 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 56 | 71 | 1.4E-13 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 78 | 92 | 1.4E-13 | IPR001848 |
| Hamap | MF_00508 | 30S ribosomal protein S10 [rpsJ]. | 19 | 118 | 18.943674 | IPR001848 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45030.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_013905992.1 | 40S ribosomal protein S20-1 [Monoraphidium neglectum] | 0 |
| P35686 | Small ribosomal subunit protein uS10 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7S3QRD8 | Ribosomal_S10 domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS5931 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology