Basic Information
Locus ID:
Dusal.0041s00007.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold41 | 77591 | 105153 | + | Dusal.0041s00007.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 95,672.69 Da | 44.69 | 89.25 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 55 | 520 | 1.43E-27 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 453 | 685 | 2.38E-17 | IPR036322 |
| SUPERFAMILY | SSF47473 | EF-hand | 734 | 845 | 4.2E-6 | IPR011992 |
| Gene3D | G3DSA:2.130.10.10 | - | 20 | 305 | 1.7E-28 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 306 | 541 | 4.4E-18 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 545 | 704 | 5.3E-11 | IPR015943 |
| Gene3D | G3DSA:1.10.238.10 | - | 730 | 854 | 8.6E-6 | - |
| SMART | SM00320 | WD40_4 | 633 | 674 | 4.2E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 237 | 274 | 3.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 391 | 430 | 8.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 481 | 523 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 345 | 384 | 180.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 184 | 223 | 78.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 95 | 137 | 200.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 51 | 92 | 20.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 642 | 683 | 12.647216 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 642 | 677 | 10.205597 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042926231.1 | uncharacterized protein CHLRE_03g185650v5 [Chlamydomonas reinhardtii] | 0 |
| A8IRK7 | Cilia- and flagella-associated protein 251 OS=Chlamydomonas reinhardtii OX=3055 GN=CFAP251 PE=1 SV=1 | 0 | |
| TrEMBL | A0A250X9E1 | WD_REPEATS_REGION domain-containing protein OS=Chlamydomonas eustigma OX=1157962 GN=CEUSTIGMA_g7129.t1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0035s00014.v1.0, Dusal.0041s00007.v1.0 ... |