Basic Information
Locus ID:
Dusal.0040s00008.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
CHY zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold40 | 102885 | 135406 | + | Dusal.0040s00008.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 136,847.44 Da | 59.30 | 64.23 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 1168 | 1211 | 2.6304E-17 | - |
| CDD | cd12108 | Hr-like | 707 | 809 | 3.34654E-19 | - |
| Pfam | PF14599 | Zinc-ribbon | 1216 | 1273 | 7.1E-22 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 1060 | 1112 | 2.8E-10 | IPR008913 |
| Pfam | PF13639 | Ring finger domain | 1168 | 1210 | 3.9E-9 | IPR001841 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 705 | 810 | 5.5E-8 | IPR012312 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1103 | 1162 | 5.49E-16 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1166 | 1224 | 3.05E-9 | - |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 1060 | 1101 | 6.67E-6 | IPR037274 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 682 | 831 | 7.7E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1162 | 1213 | 9.7E-11 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 1240 | 1275 | 2.8E-14 | - |
| SMART | SM00184 | ring_2 | 1169 | 1210 | 9.1E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1169 | 1211 | 11.648357 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1102 | 1168 | 29.743618 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 1060 | 1100 | 11.039186 | IPR008913 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1031 | 1052 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 575 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 896 | 975 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1030 | 1052 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 582 | - | - |
| Coils | Coil | Coil | 752 | 772 | - | - |
| Coils | Coil | Coil | 145 | 168 | - | - |
| Coils | Coil | Coil | 597 | 617 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_002950146.1 | hypothetical protein VOLCADRAFT_60154 [Volvox carteri f. nagariensis] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3VUT7 | Hemerythrin domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS20786 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology