Basic Information
Locus ID:
Dusal.0035s00014.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
microtubule binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold35 | 184557 | 210643 | + | Dusal.0035s00014.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 154,427.77 Da | 49.88 | 69.19 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 852 | 881 | 0.054 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 481 | 926 | 8.24E-33 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1054 | 1160 | 6.04E-6 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 441 | 723 | 7.9E-48 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 743 | 975 | 3.9E-24 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 976 | 1165 | 1.6E-5 | IPR015943 |
| SMART | SM00320 | WD40_4 | 561 | 600 | 4.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 656 | 695 | 0.73 | IPR001680 |
| SMART | SM00320 | WD40_4 | 846 | 885 | 6.0E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 516 | 558 | 41.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 760 | 799 | 0.21 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1122 | 1158 | 3.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 663 | 704 | 10.241105 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 853 | 887 | 9.372231 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 767 | 808 | 8.67045 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 682 | 696 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 965 | 1024 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1354 | 1372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1354 | 1376 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002947240.1 | hypothetical protein VOLCADRAFT_103323 [Volvox carteri f. nagariensis] | 0 |
| A8J1V4 | Cilia- and flagella-associated protein 44 OS=Chlamydomonas reinhardtii OX=3055 GN=CFAP44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4CTW5 | WD_REPEATS_REGION domain-containing protein OS=Volvox reticuliferus OX=1737510 GN=Vretifemale_16510 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0035s00014.v1.0, Dusal.0041s00007.v1.0 ... |