Basic Information
Locus ID:
Dusal.0032s00028.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
incompatibility protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold32 | 599640 | 609342 | - | Dusal.0032s00028.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 32,972.81 Da | 27.08 | 76.11 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 14 | 311 | 8.52322E-95 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 227 | 268 | 5.6E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 14 | 50 | 7.0E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 103 | 139 | 2.6E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 54 | 98 | 2.0E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 189 | 223 | 1.5E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 144 | 182 | 1.4E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 273 | 310 | 2.8E-11 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 14 | 312 | 1.19E-89 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 189 | 314 | 6.2E-44 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 5 | 188 | 3.9E-67 | IPR015943 |
| SMART | SM00320 | WD40_4 | 53 | 98 | 1.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 11 | 50 | 1.7E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 226 | 268 | 5.7E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 272 | 311 | 5.9E-13 | IPR001680 |
| SMART | SM00320 | WD40_4 | 143 | 182 | 3.7E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 101 | 140 | 1.5E-13 | IPR001680 |
| SMART | SM00320 | WD40_4 | 185 | 223 | 5.0E-9 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 150 | 183 | 11.101955 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 279 | 314 | 15.451933 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 108 | 149 | 16.055872 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 279 | 314 | 17.22551 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 108 | 145 | 12.710129 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 192 | 232 | 13.716598 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 18 | 59 | 18.361729 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 66 | 99 | 9.282875 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 18 | 55 | 14.291939 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 73 | 107 | 13.048234 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 150 | 191 | 13.85027 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 192 | 226 | 10.996502 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 169 | 183 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 37 | 51 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 210 | 224 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 85 | 99 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 127 | 141 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 37 | 51 | 4.7E-10 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 169 | 183 | 4.7E-10 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 85 | 99 | 4.7E-10 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042921878.1 | uncharacterized protein CHLRE_08g364000v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A4U0V5E7 | Vegetative incompatibility protein HET-E-1 (Fragment) OS=Friedmanniomyces simplex OX=329884 GN=B0A55_13545 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |