Basic Information
Locus ID:
Dusal.0020s00028.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
to Saccharomyces cerevisiae SGS1 (YMR190C)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold20 | 481771 | 496267 | + | Dusal.0020s00028.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 46,741.69 Da | 41.35 | 72.84 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18794 | SF2_C_RecQ | 8 | 150 | 1.98188E-57 | - |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 34 | 140 | 3.5E-16 | IPR001650 |
| Pfam | PF16124 | RecQ zinc-binding | 152 | 222 | 2.7E-15 | IPR032284 |
| Pfam | PF09382 | RQC domain | 231 | 343 | 6.3E-22 | IPR018982 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 10 | 275 | 1.49E-48 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 6 | 150 | 3.4E-38 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 152 | 341 | 2.5E-42 | IPR036388 |
| SMART | SM00490 | helicmild6 | 53 | 141 | 1.5E-22 | IPR001650 |
| SMART | SM00956 | RQC_2 | 235 | 344 | 1.8E-20 | IPR018982 |
| TIGRFAM | TIGR00614 | recQ_fam: ATP-dependent DNA helicase, RecQ family | 8 | 287 | 1.6E-72 | IPR004589 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 19 | 184 | 19.780571 | IPR001650 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 396 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10930.1 | DNA helicase (RECQl4A). DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. | 0 |
| RefSeq | XP_042925217.1 | uncharacterized protein CHLRE_04g219750v5 [Chlamydomonas reinhardtii] | 0 |
| Q8L840 | ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1 | 0 | |
| TrEMBL | A0A699ZZC3 | ATP-dependent DNA helicase (Fragment) OS=Haematococcus lacustris OX=44745 GN=HaLaN_24867 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology