Basic Information
Locus ID:
Dusal.0020s00020.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Belongs to the histone deacetylase family. HD Type 1 subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold20 | 391920 | 406558 | + | Dusal.0020s00020.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 47,910.57 Da | 27.96 | 73.48 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00850 | Histone deacetylase domain | 24 | 315 | 1.5E-83 | IPR023801 |
| SUPERFAMILY | SSF52768 | Arginase/deacetylase | 6 | 371 | 1.15E-115 | IPR023696 |
| Gene3D | G3DSA:3.40.800.20 | Histone deacetylase domain | 3 | 378 | 1.2E-133 | IPR037138 |
| PIRSF | PIRSF037913 | HDAC_I_euk | 1 | 412 | 4.1E-196 | IPR003084 |
| PRINTS | PR01271 | Histone deacetylase signature | 111 | 131 | 2.0E-55 | IPR003084 |
| PRINTS | PR01271 | Histone deacetylase signature | 90 | 107 | 2.0E-55 | IPR003084 |
| PRINTS | PR01271 | Histone deacetylase signature | 59 | 77 | 2.0E-55 | IPR003084 |
| PRINTS | PR01271 | Histone deacetylase signature | 152 | 168 | 2.0E-55 | IPR003084 |
| PRINTS | PR01271 | Histone deacetylase signature | 212 | 225 | 2.0E-55 | IPR003084 |
| PRINTS | PR01271 | Histone deacetylase signature | 229 | 247 | 2.0E-55 | IPR003084 |
| PRINTS | PR01270 | Histone deacetylase superfamily signature | 165 | 180 | 2.5E-23 | IPR000286 |
| PRINTS | PR01270 | Histone deacetylase superfamily signature | 133 | 156 | 2.5E-23 | IPR000286 |
| PRINTS | PR01270 | Histone deacetylase superfamily signature | 251 | 261 | 2.5E-23 | IPR000286 |
| PRINTS | PR01271 | Histone deacetylase signature | 26 | 43 | 2.0E-55 | IPR003084 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44680.1 | histone deacetylase 9. Class I RPD3 type protein | 0 |
| RefSeq | XP_001695812.2 | uncharacterized protein CHLRE_16g673150v5 [Chlamydomonas reinhardtii] | 0 |
| Q8H0W2 | Histone deacetylase 9 OS=Arabidopsis thaliana OX=3702 GN=HDA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S0RD65 | Histone deacetylase OS=Chlamydomonas leiostraca OX=1034604 GN=CLEI1391_LOCUS6045 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology