Basic Information
Locus ID:
Dusal.0015s00022.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold15 | 430559 | 442288 | - | Dusal.0015s00022.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 78,079.73 Da | 48.86 | 89.39 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 389 | 674 | 7.53443E-90 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 417 | 454 | 2.7E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 685 | 713 | 0.017 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 596 | 633 | 6.7E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 502 | 550 | 3.7E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 458 | 496 | 2.8E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 554 | 592 | 4.1E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 638 | 674 | 2.2E-5 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 388 | 691 | 2.51E-71 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 367 | 520 | 4.6E-40 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 605 | 716 | 2.1E-33 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 523 | 604 | 2.6E-26 | IPR015943 |
| SMART | SM00320 | WD40_4 | 457 | 496 | 3.1E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 595 | 634 | 8.7E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 499 | 550 | 2.7E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 416 | 454 | 4.1E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 376 | 413 | 31.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 677 | 716 | 0.32 | IPR001680 |
| SMART | SM00320 | WD40_4 | 637 | 674 | 7.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 553 | 592 | 2.0E-8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 560 | 601 | 14.986489 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 661 | 675 | 9.271977 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 602 | 643 | 16.724236 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 464 | 505 | 14.384962 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 423 | 463 | 13.148488 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 602 | 638 | 12.973764 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 423 | 458 | 10.047417 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 464 | 497 | 11.444681 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 525 | 559 | 9.773251 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 560 | 596 | 11.629227 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 661 | 675 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 621 | 635 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 483 | 497 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 537 | 551 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 441 | 455 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 579 | 593 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 579 | 593 | 9.6E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 441 | 455 | 9.6E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 661 | 675 | 9.6E-9 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042921878.1 | uncharacterized protein CHLRE_08g364000v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A699YZT4 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Haematococcus lacustris OX=44745 GN=HaLaN_08210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 24 | Dusal.0003s00030.v1.0, Dusal.0015s00021.v1.0 ... |