Basic Information
Locus ID:
Dusal.0013s00030.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Raffinose synthase or seed imbibition protein Sip1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold13 | 724730 | 750232 | + | Dusal.0013s00030.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 62,930.81 Da | 45.16 | 74.87 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 85 | 251 | 1.2E-61 | IPR008811 |
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 305 | 421 | 5.0E-18 | IPR008811 |
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 8 | 77 | 1.4E-9 | IPR008811 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 34 | 239 | 1.58E-26 | IPR017853 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 474 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57520.1 | seed imbibition 2. | 0 |
| RefSeq | XP_002959323.1 | hypothetical protein VOLCADRAFT_100756, partial [Volvox carteri f. nagariensis] | 0 |
| Q94A08 | Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7S3QV97 | Raffinose synthase (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS9379 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology