Basic Information
Locus ID:
Dusal.0010s00020.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold10 | 439538 | 451197 | + | Dusal.0010s00020.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 35,953.29 Da | 28.79 | 72.34 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 72 | 330 | 5.99548E-91 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 79 | 119 | 3.4E-10 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 292 | 329 | 5.4E-10 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 210 | 245 | 7.6E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 165 | 203 | 2.4E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 249 | 287 | 6.7E-10 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 124 | 161 | 1.4E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 70 | 329 | 4.58E-91 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 161 | 253 | 1.0E-35 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 254 | 333 | 5.4E-31 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 62 | 160 | 1.1E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 164 | 203 | 8.0E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 78 | 119 | 3.9E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 206 | 245 | 4.9E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 291 | 330 | 3.5E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 248 | 287 | 1.6E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 122 | 161 | 1.8E-10 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 129 | 166 | 12.525585 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 298 | 333 | 17.526274 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 213 | 248 | 14.423758 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 171 | 204 | 15.053326 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 85 | 128 | 12.780889 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 85 | 122 | 9.731054 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 213 | 254 | 18.1278 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 129 | 170 | 16.122709 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 171 | 204 | 12.420132 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 255 | 287 | 12.973764 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 255 | 287 | 15.755108 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 298 | 333 | 15.689205 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 148 | 162 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 106 | 120 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 232 | 246 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 190 | 204 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 190 | 204 | 5.7E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 274 | 288 | 5.7E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 232 | 246 | 5.7E-9 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 53 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |