Basic Information
Locus ID:
Dusal.0008s00018.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold8 | 347318 | 353275 | - | Dusal.0008s00018.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 18,746.91 Da | 27.17 | 76.45 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 87 | 154 | 1.82788E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 85 | 152 | 6.6E-8 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 54 | 75 | 0.014 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 8 | 162 | 2.27E-33 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 7 | 166 | 2.8E-39 | - |
| SMART | SM00054 | efh_1 | 87 | 115 | 0.0084 | IPR002048 |
| SMART | SM00054 | efh_1 | 50 | 78 | 8.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 128 | 156 | 0.054 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 124 | 159 | 10.942794 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 83 | 118 | 13.425486 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 53 | 81 | 10.384886 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 59 | 71 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 96 | 108 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 137 | 149 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03400.1 | EF hand calcium-binding protein family. | 0 |
| RefSeq | XP_002951476.1 | hypothetical protein VOLCADRAFT_75021 [Volvox carteri f. nagariensis] | 0 |
| P25296 | Calcineurin subunit B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CNB1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A150GD50 | Calcineurin subunit B OS=Gonium pectorale OX=33097 GN=GPECTOR_33g644 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology